Nextflow workflow report

[nauseous_goldwasser] (resumed run)

Workflow execution completed successfully!
Run times
17-Aug-2021 05:41:09 - 17-Aug-2021 23:14:41 (duration: 17h 33m 32s)
  1954 succeeded  
  10 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run /project/ag100pest/software/polishCLR/main.nf --primary_assembly /project/ag100pest/Pectinophora_gossypiella_male/RawData/3-unzip/all_p_ctg.fasta --mito_assembly /project/ag100pest/Pectinophora_gossypiella_male/MT_Contig/Pgos/Pgos_MitoFinder_mitfi_Final_Results/Pgos_mtDNA_contig.fasta --illumina_reads '/project/ag100pest/Pectinophora_gossypiella_male/Illumina_polishing/JAMU*{R1,R2}.fastq.bz2' --pacbio_reads /project/ag100pest/Pectinophora_gossypiella_male/RawData/m54334U_190823_194159.subreads.bam --k 21 -resume
CPU-Hours
89.2 (0.9% cached)
Launch directory
/90daydata/project/ag100pest/Pectinophora_gossypiella_male/PolishCLR
Work directory
/90daydata/project/ag100pest/Pectinophora_gossypiella_male/PolishCLR/work
Project directory
/project/ag100pest/software/polishCLR
Script name
main.nf
Script ID
c58ac1011dbaf0761cd9e1fa7052f2fa
Workflow session
eaee7cae-f8b8-4afc-a247-5ef848c3403a
Workflow profile
standard
Nextflow version
version 21.04.2, build 5559 (12-07-2021 13:12 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)